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Taxonomic tree
Occurrence records
Dataset
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About BISMaL
About BISMaL data
日本語
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Taxonomic tree
Occurrence records
Dataset
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About BISMaL
About BISMaL data
日本語
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Environmental baseline data in abyssal plain off Minami Torishima based on 18S rRNA gene obtained from the 2022 cruise
Abstract
SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains 18S rRNA gene based phylogenetic composition of meiofauna community determined from sediment core samples which have been collected by the Shinkai 6500 in the 2022 cruise of R/V Yokosuka (YK22-08C). The two kinds of PCR primer set have been used for the same sample to compare the phylogenetic composition.
Citation
Inomata K. Kawagucci S. Miwa T. and Yamamoto H (2023) Environmental baseline data in abyssal plain off Minami Torishima based on 16S rRNA gene, 18S rRNA gene, physicochemical parameters and meiofauna community, and megafauna occurrence. https://doi.org/10.48518/00018
Literature
Information on literature which is important for understanding data, such as literature which became the basis of the data set, is displayed.
URL
License
This work is licensed under a
Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0 License
.
Contacts
Kentaro Inomata
Resource Contact, Resource Creator, Metadata Provider
Organization: IDEA Consultants
Phone: +81-54-622-9553
Address: 1334-5 Riemon Yaizu-shi Shizuoka 421-0212 Japan
Home Page:
Email: inm22253@ideacon.co.jp
Shinsuke Kawagucci
Resource Contact, Resource Creator, Metadata Provider
Organization: JAMSTEC
Phone: +81-46-867-9743
Address: 2-15 Natsushima-cho Yokosuka-shi Kanagawa 237-0061 Japan
Home Page:
Email: kawagucci@jamstec.go.jp
Hiroyuki Yamamoto
Resource Contact, Resource Creator, Metadata Provider
Organization: JAMSTEC
Phone: +81-46-867-9580
Address: 2-15 Natsushima-cho Yokosuka-shi Kanagawa 237-0061 Japan
Home Page:
Email: kyama@jamstec.go.jp
Datasets and providers
JAMSTEC
-
Coastal Ecosystem Monitoring in the Tsugaru strait side of Shimokita
-
E-library of Deep-sea Images, JAMSTEC
-
Environmental baseline data in abyssal plain off Minami Torishima based on 16S rRNA gene
-
Environmental baseline data in abyssal plain off Minami Torishima based on 18S rRNA gene
-
Environmental baseline data in abyssal plain off Minami Torishima based on megafauna occurrence
-
Environmental baseline data in abyssal plain off Minami Torishima based on megafauna occurrence obtained from the 2022 cruise
-
Environmental baseline data in abyssal plain off Minami Torishima based on physicochemical parameters and meiofauna community
-
Environmental baseline data in abyssal plain off Minami Torishima based on physicochemical parameters and meiofauna community obtained from the 2022 cruise
-
Image dataset of ophiuroid and other deep sea benthic organisms in 2015 extracted from the survey off Sanriku, Japan, by the research following the Great East Japan Earthquake 2011
-
Images in Coral Reef Network WEB System, as a snapshot of fauna and flora around coral reefs in Ryukyu Islands
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JAMSTEC_MULTISPLASH2006_SagamiBay_Siphonophora
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Marine Biological Sample Database, JAMSTEC
-
Metabarcoding data set at the Iheya-Minor Ridge in the Sakai hydrothermal vent field
-
Monitoring of deep-sea fish diversity using environmental DNA metabarcoding of pumped deep-sea water in Sagami and Suruga Bays, Japan
-
Occurrence dataset of demersal fish and benthic organisms in the deep-sea off the northeastern coast of Japan, recorded by ROV after the 2011 Earthquake off the Pacific coast of Tohoku
-
Species list recorded by baited cameras at deep sea area in Japan
Occurrence records
Occurrence records →
[Map・Summary]
■
Number of record
1,372
■
Record acquisition period
2022/04/24 ~ 2022/05/04
* Date last modified : 2024/10/02
■
Record acquisition range
Latitude
22.9966 ~ 23.0629
Longitude
153.8771 ~ 154.4105
Depth
5538 ~ 5642 m
[Environment]
[Registered taxon]
■
Number of taxonomy
70
Taxonomy
■
Number of specimen
21
Specimen
Taxon level lower than family :
85
%
Taxon level lower than species :
21
%
Scientific name list
Displayed result
10
50
100
500
/page
[DNA derived data]
■
Number of records
1,372
Occurrences with DNA derived data :
100
%
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