https://www.godac.jamstec.go.jp/ipt Resource metadata en-us Fri, 27 Feb 2026 17:12:39 +0900 GBIF IPT 3.0.1-r2584670 http://cyber.law.harvard.edu/rss/rss.html 15 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_bait_deepsea [Species list focused on demersal fish and scavenging animal recorded by the baited camera (http://www.jamstec.go.jp/bdive/j/photosvideos/). Species names were listed in each cast of cameras, and will be added as the seasonal and annual survey in the future. This research project was conducted in the Japanese EEZ including Suruga and Sagami Bays. This data sets will be used as the background data for environmental DNA analysis of deep-sea water.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_bait_deepsea https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_bait_deepsea Fri, 27 Feb 2026 17:12:39 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_bait_deepsea/v1.51 https://www.godac.jamstec.go.jp/ipt/resource?r=inm_al [Algae specimens deposited in the Ibaraki Nature Museum] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=inm_al https://www.godac.jamstec.go.jp/ipt/archive.do?r=inm_al Wed, 18 Feb 2026 09:36:48 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=inm_al/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=inm_mo [Mollusk specimens deposited in the Ibaraki Nature Museum] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=inm_mo https://www.godac.jamstec.go.jp/ipt/archive.do?r=inm_mo Thu, 05 Feb 2026 16:45:50 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=inm_mo/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=seaslug-world_kimoto [This dataset comprises occurrence records on sea slugs, collected from divers worldwide via the online platform "Sekai no Umiushi" (https://seaslug.world/) since 2015. Data collection remains ongoing, and the dataset currently includes approximately 40,000 records. It broadly covers groups within the Heterobranchia commonly known as "sea slugs," including not only nudibranchs (Nudibranchia) but also sea hares (Aplysiida), headshield slugs (Cephalaspidea), and sap-sucking slugs (Sacoglossa). The key feature of this dataset is that every record is accompanied by a high-resolution photograph that serves as the basis for identification. All species identifications are consistently performed by the project administrator based on these photographs, ensuring high taxonomic accuracy and consistency throughout the entire dataset. Each record includes a scientific name, vernacular name, geographic coordinates, event date, depth, and a URL to the photograph. This dataset, underpinned by photographic evidence, provides valuable contributions to studies on sea slug biogeography, understanding of diversity patterns, and marine biodiversity monitoring research through citizen science.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=seaslug-world_kimoto https://www.godac.jamstec.go.jp/ipt/archive.do?r=seaslug-world_kimoto Wed, 04 Feb 2026 16:12:41 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=seaslug-world_kimoto/v1.3 https://www.godac.jamstec.go.jp/ipt/resource?r=inm_fi [Fish specimens deposited in the Ibaraki Nature Museum] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=inm_fi https://www.godac.jamstec.go.jp/ipt/archive.do?r=inm_fi Tue, 23 Dec 2025 15:29:02 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=inm_fi/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=oberlc_littoral_organisms2025 [The “Simultaneous surveys of littoral organisms in Osaka Bay” is a project to survey all living creatures in Osaka Bay simultaneously, conducted by the “Osaka Bay Environmental Restoration Liaison Committee” consisting of universities, civic groups, national and local governments and others, with the cooperation of groups working along the coast of Osaka Bay. The results of this survey will be the basis for understanding the water environment in various areas of Osaka Bay. This dataset is from the survey results conducted in 2025.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=oberlc_littoral_organisms2025 https://www.godac.jamstec.go.jp/ipt/archive.do?r=oberlc_littoral_organisms2025 Thu, 18 Dec 2025 11:25:28 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=oberlc_littoral_organisms2025/v1.1 https://www.godac.jamstec.go.jp/ipt/resource?r=stranding_hokkaido [The Stranding Network Hokkaido (SNH) has collected cetacean stranding information since 2007 along the coast of Hokkaido, Japan, with the collaboration of the Hokkaido University, Tokyo University of Agriculture, Obihiro University of Agriculture and Veterinary Medicine, and with assistance from the National Museum of Natural History, and the Institute of Cetacean Research, Japan. This data set includes at least 23 cetacean species.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=stranding_hokkaido https://www.godac.jamstec.go.jp/ipt/archive.do?r=stranding_hokkaido Wed, 18 Sep 2024 15:23:53 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=stranding_hokkaido/v1.12 https://www.godac.jamstec.go.jp/ipt/resource?r=oberlc_littoral_organisms2024 [The “Simultaneous surveys of littoral organisms in Osaka Bay” is a project to survey all living creatures in Osaka Bay simultaneously, conducted by the “Osaka Bay Environmental Restoration Liaison Committee” consisting of universities, civic groups, national and local governments and others, with the cooperation of groups working along the coast of Osaka Bay. The results of this survey will be the basis for understanding the water environment in various areas of Osaka Bay. This dataset is from the survey results conducted in 2024.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=oberlc_littoral_organisms2024 https://www.godac.jamstec.go.jp/ipt/archive.do?r=oberlc_littoral_organisms2024 Thu, 13 Feb 2025 20:55:34 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=oberlc_littoral_organisms2024/v1.1 https://www.godac.jamstec.go.jp/ipt/resource?r=yokohama_esri_benthic_animal [This dataset is a compilation of benthic animal data obtained from marine organism surveys conducted by the Yokohama Environmental Science Research Institute. The main survey area is the coastal area of Yokohama City in Tokyo Bay. The original data is published on the website as the report "Yokohama's rivers and sea creatures" (https://www.city.yokohama.lg.jp/kurashi/machizukuri-kankyo/kankyohozen/kansoku/science/shiryo/kawatoumi/). For more information on the survey, contact to Yokohama Environmental Science Research Institute (mk-kanken@city.yokohama.lg.jp).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=yokohama_esri_benthic_animal https://www.godac.jamstec.go.jp/ipt/archive.do?r=yokohama_esri_benthic_animal Wed, 19 Mar 2025 10:42:47 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=yokohama_esri_benthic_animal/v1.5 https://www.godac.jamstec.go.jp/ipt/resource?r=fb612 [Fish specimens deposited at the Department of Zoology, National Museum of Nature and Science] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=fb612 https://www.godac.jamstec.go.jp/ipt/archive.do?r=fb612 Fri, 14 Jun 2024 16:09:28 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=fb612/v1.59 https://www.godac.jamstec.go.jp/ipt/resource?r=yokohama_esri_seagrasses_seaweeds [This dataset is a compilation of seagrasses and seaweeds data obtained from marine organism surveys conducted by the Yokohama Environmental Science Research Institute. The primary survey area is the coastal area of Yokohama City in Tokyo Bay. The original data is published on the website as the report "Yokohama's rivers and sea creatures" (https://www.city.yokohama.lg.jp/kurashi/machizukuri-kankyo/kankyohozen/kansoku/science/shiryo/kawatoumi/). For more information on the survey, contact to Yokohama Environmental Science Research Institute (mk-kanken@city.yokohama.lg.jp).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=yokohama_esri_seagrasses_seaweeds https://www.godac.jamstec.go.jp/ipt/archive.do?r=yokohama_esri_seagrasses_seaweeds Fri, 03 Oct 2025 10:22:51 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=yokohama_esri_seagrasses_seaweeds/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=yokohama_esri_fish [This dataset is a compilation of fish data obtained from marine organism surveys conducted by the Yokohama Environmental Science Research Institute. The primary survey area is the coastal area of Yokohama City in Tokyo Bay. The original data is published on the website as the report "Yokohama's rivers and sea creatures" (https://www.city.yokohama.lg.jp/kurashi/machizukuri-kankyo/kankyohozen/kansoku/science/shiryo/kawatoumi/). For more information on the survey, contact to Yokohama Environmental Science Research Institute (mk-kanken@city.yokohama.lg.jp).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=yokohama_esri_fish https://www.godac.jamstec.go.jp/ipt/archive.do?r=yokohama_esri_fish Wed, 15 Oct 2025 09:09:47 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=yokohama_esri_fish/v1.2 https://www.godac.jamstec.go.jp/ipt/resource?r=bdcj_mot-tf [This dataset contains data of the occurrence of macrozoobenthos which was recorded at survey sites of the Monitoring Sites 1000 Projects: Coastal Area Survey (Tidal flats). The annual survey was carried out with eight places of Japanese coast from north (Hokkaido) to south (Okinawa). In addition, the data about reference specimens in the survey every five years is included. The data of this dataset is derived from the data file of the Monitoring Sites 1000 Projects: Coastal Area Survey. The data file includes the information about quantity data of macrozoobenthos (the number of individuals per quadrats).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=bdcj_mot-tf https://www.godac.jamstec.go.jp/ipt/archive.do?r=bdcj_mot-tf Wed, 28 May 2025 17:09:43 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=bdcj_mot-tf/v1.83 https://www.godac.jamstec.go.jp/ipt/resource?r=bdcj_mot-sb [This dataset contains data of the occurrence of seagrass species which was recorded at the Monitoring Sites 1000 Projects: Coastal Area Survey (Seagrass beds). The annual survey was carried out with six places of Japanese coast from north (Hokkaido) to south (Okinawa). In addition, the data about reference specimens (seagrass and macrozoobenthos) in the survey every five years is included. The data of this dataset is derived from the data file of the Monitoring Sites 1000 Projects: Coastal Area Survey. The data file includes the information about quantity data of seagrass (a cover degree, biomass).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=bdcj_mot-sb https://www.godac.jamstec.go.jp/ipt/archive.do?r=bdcj_mot-sb Fri, 14 Jun 2024 16:12:25 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=bdcj_mot-sb/v1.84 https://www.godac.jamstec.go.jp/ipt/resource?r=bdcj_mot-rs [This dataset contains data of the occurrence of the focal species, such as sessile organisms, which was recorded at the Monitoring Sites 1000 Projects: Coastal Area Survey (Rocky shore). The annual survey was carried out with six places of Japanese coast from north (Hokkaido) to south (Okinawa). In addition, the data about reference specimens and the occurrence of organisms within quadrats in five years is included. The data of this dataset is derived from the data file of the Monitoring Sites 1000 Projects: Coastal Area Survey. The data file includes the information about quantity data of organisms (a cover degree of sessile organisms per quadrats).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=bdcj_mot-rs https://www.godac.jamstec.go.jp/ipt/archive.do?r=bdcj_mot-rs Fri, 14 Jun 2024 16:07:07 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=bdcj_mot-rs/v1.85 https://www.godac.jamstec.go.jp/ipt/resource?r=bdcj_mot-ab [This dataset contains data of the occurrence of seaweed species which was recorded at the Monitoring Sites 1000 Projects: Coastal Area Survey (Algal beds). The annual survey was carried out with six places of Japanese coast from north (Hokkaido) to south (Kagoshima). In addition, the data about reference specimens in the survey every five years is included. The data of this dataset is derived from the data file of the Monitoring Sites 1000 Projects: Coastal Area Survey. The data file includes the information about quantity data of seaweed (a cover degree, biomass).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=bdcj_mot-ab https://www.godac.jamstec.go.jp/ipt/archive.do?r=bdcj_mot-ab Fri, 14 Jun 2024 16:08:58 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=bdcj_mot-ab/v1.83 https://www.godac.jamstec.go.jp/ipt/resource?r=nsmt_po_r [Sponge specimens deposited at the Department of Zoology, National Museum of Nature and Science] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=nsmt_po_r Wed, 17 Nov 2021 16:12:58 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=nsmt_po_r/v1.2 https://www.godac.jamstec.go.jp/ipt/resource?r=oberlc_littoral_organisms [The “Simultaneous surveys of littoral organisms in Osaka Bay” is a project to survey all living creatures in Osaka Bay simultaneously, conducted by the “Osaka Bay Environmental Restoration Liaison Committee” consisting of universities, civic groups, national and local governments and others, with the cooperation of groups working along the coast of Osaka Bay. The results of this survey will be the basis for understanding the water environment in various areas of Osaka Bay.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=oberlc_littoral_organisms https://www.godac.jamstec.go.jp/ipt/archive.do?r=oberlc_littoral_organisms Thu, 04 Jan 2024 22:51:19 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=oberlc_littoral_organisms/v1.1 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sampledb [This dataset contains data of biological samples which were collected during scientific missions of JAMSTEC ships (NATSUSHIMA, KAIYO, YOKOSUKA, KAIREI and MIRAI) and submersibles.Data of this dataset is derived from the Marine Biological Sample Database of JAMSTEC. At the original database, you may search sample information such as number of individuals, preservation methods, sex, life stages, identification, collecting information and related literatures.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sampledb https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sampledb Tue, 30 Sep 2025 17:57:32 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sampledb/v1.91 https://www.godac.jamstec.go.jp/ipt/resource?r=jodc_j-doss [　Identified data set including about 290,000 records of the plankton observation data observed by the Japanese institutes concerned (Ministry of Environment, Fishery Agency, Meteorological Agency and Local gorvernments etc.) from 1951 to 2006.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jodc_j-doss https://www.godac.jamstec.go.jp/ipt/archive.do?r=jodc_j-doss Fri, 14 Jun 2024 16:10:25 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jodc_j-doss/v1.90 https://www.godac.jamstec.go.jp/ipt/resource?r=smbl_inv [Invertebrate collection deposited in the Seto Marine Biological Laboratory, Kyoto University] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=smbl_inv https://www.godac.jamstec.go.jp/ipt/archive.do?r=smbl_inv Fri, 14 Jun 2024 16:10:25 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=smbl_inv/v1.36 https://www.godac.jamstec.go.jp/ipt/resource?r=fps_scolopacidae_charadriidae [Occurrence data from Fixed Point Survey for Shorebirds of the family Scolopacidae and Charadriidae conducted by Ministry of Environment, Japan.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=fps_scolopacidae_charadriidae https://www.godac.jamstec.go.jp/ipt/archive.do?r=fps_scolopacidae_charadriidae Thu, 16 May 2024 18:45:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=fps_scolopacidae_charadriidae/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=kw_pt [This dataset contains data of brachyuran crabs collected by Keiji Wada in 1982 in Thailand and in 2000 in the Philippines.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=kw_pt https://www.godac.jamstec.go.jp/ipt/archive.do?r=kw_pt Fri, 14 Jun 2024 16:08:58 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=kw_pt/v1.45 https://www.godac.jamstec.go.jp/ipt/resource?r=univ_ryukyus_annelids_ryukyu [Marine biodiversity is threatened and comprehensive assessments of marine species are needed for biodiversity management and research priorities, especially for little-studied areas and taxa. The region of the Ryukyu Islands, in subtropical southern Japan, is a marine biodiversity hotspot, however most marine invertebrate taxa here can be considered grossly understudied. Despite the known high diversity of marine annelids, both in terms of species richness and ecological functions, a review of the knowledge accumulated on them in the Ryukyus is not yet available. To provide an overview of past research and identify gaps, we reviewed 149 publications related to the topic and compiled 1986 literature records. Despite large discrepancies in groups and environments studied, we found indications of high diversity of marine annelids in the Ryukyus, with 445 nominal species recorded, including 59 described from the region, comprising approximately a quarter of Japan’s marine annelid fauna. However, unequal sampling effort was observed across the Ryukyus, with Okinawa-jima and Amami-Oshima being the most well-investigated islands, whereas Yakushima and Miyako-jima were almost completely uninvestigated. Intertidal and sand bottoms were the most well-studied environments, while coral reefs have been scarcely studied. Much more research is needed to understand marine annelid diversity in the Ryukyus, with taxonomic work needed for all families supported by sampling expeditions to underexplored islands and environments, with follow-up studies on ecology, reproduction, and marine natural products also sorely needed. Thus, despite indications of very high diversity, we conclude that marine annelid research in the Ryukyus is still nascent.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=univ_ryukyus_annelids_ryukyu https://www.godac.jamstec.go.jp/ipt/archive.do?r=univ_ryukyus_annelids_ryukyu Thu, 13 Nov 2025 19:59:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=univ_ryukyus_annelids_ryukyu/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=ogaworks_okinawaturtlearchive [Motivated by the question of how many sea turtles inhabit nearby coastal waters, we explored methods by which non-specialists could observe sea turtles at sea. We examined the feasibility of using drones for survey and observation. In March 2025, we started conducting surveys on sea turtles using a DJI Air 3 drone in the coastal waters of Maeda, Onna Village, where drone flights are not prohibited. Surveys were conducted approximately once per week. The drone was flown offshore and captured footage from an altitude of 100 meters using a 24 mm wide-angle lens. Upon detecting sea turtles, the drone descended to an altitude of 10 meters to obtain detailed footage using a 70 mm lens. From the drone footage, we extracted still images of clearly visible carapace patterns and performed visual individual identification. For each identified individual, we recorded scientific name, identification traits, and sex. By October 2025, we had identified 202 individual sea turtles, confirming that the data can be structured as biological occurrence records with precise temporal and spatial information. These findings demonstrate that drone-based observation is a viable method for collecting quantitative data on sea turtles at sea. We propose to disseminate this methodology and establish a collaborative network to enable similar surveys in other regions and seasons.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=ogaworks_okinawaturtlearchive https://www.godac.jamstec.go.jp/ipt/archive.do?r=ogaworks_okinawaturtlearchive Tue, 04 Nov 2025 15:19:12 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=ogaworks_okinawaturtlearchive/v1.2 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_godac_coralreef_web [The Global Oceanographic Data Center (GODAC) collected pictures of marine organisms around the coral reefs in the Ryukyu Islands from citizen divers during 2002 to 2013. GODAC also collected videos through GODAC’s research activities using a small remotely-operated vehicle “Niraikanai 150”. These image collection of the pictures and videos had been published on the website of Coral Reef Network WEB System (http://www.godac.jp/coral/). The image collection can become a valuable snapshot to know a past fauna or flora in the Ryukyu Island. We generated biological occurrence records from the image collection and their metadata including locality information and vernacular name of the organisms. Latitude and longitude in a biological occurrence record was determined using locality information from the image metadata and gazetteers (Marine Regions and Google Maps). When detailed location information was available, geometries were generated in Well-known text format. Scientific names of the organisms were determined by referring with the vernacular name (Japanese name) in the metadata of the image and BISMaL (http://www.godac.jamstec.go.jp/bismal/). If specific literature was used for identification, its bibliographic title was added to each record.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_godac_coralreef_web https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_godac_coralreef_web Wed, 15 Oct 2025 10:30:26 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_godac_coralreef_web/v1.1 https://www.godac.jamstec.go.jp/ipt/resource?r=aikappu_mollusca-mitrella-martensi [This dataset includes data of a columbellid gastropod Mitrella martensi (Lischke, 1871) collected in Akkeshi-ko estuary, eastern Hokkaido, Japan in 2023 and 2024. Sample collection was conducted by Sekioka, T.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=aikappu_mollusca-mitrella-martensi https://www.godac.jamstec.go.jp/ipt/archive.do?r=aikappu_mollusca-mitrella-martensi Tue, 12 Aug 2025 14:05:50 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=aikappu_mollusca-mitrella-martensi/v1.1 https://www.godac.jamstec.go.jp/ipt/resource?r=s9-5_kelp [This dataset contains kelp occurrence data around Japan which were registered from various sources in Hokkaido and Japan by S9-5 supported by the Environment Research and Technology Development Fund (S9) of the Ministry of the Environment, Japan.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=s9-5_kelp https://www.godac.jamstec.go.jp/ipt/archive.do?r=s9-5_kelp Tue, 05 Aug 2025 14:09:19 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=s9-5_kelp/v1.58 https://www.godac.jamstec.go.jp/ipt/resource?r=rimi_24th_iso-kansatsu [A list of the species observed at the 24th citizen science field study tour in Sesoko Island, Okinawa Island in May 2018. Total 80 invertebrates species were observed in intertidal rocky shore, and Mollusca was found most.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=rimi_24th_iso-kansatsu https://www.godac.jamstec.go.jp/ipt/archive.do?r=rimi_24th_iso-kansatsu Mon, 16 Jun 2025 15:03:20 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=rimi_24th_iso-kansatsu/v1.49 https://www.godac.jamstec.go.jp/ipt/resource?r=s9-5_asia-pacific [This dataset contains marine organism occurrence data of the Asia-Pacific region which were extracted from published literature by S9-5 supported by the Environment Research and Technology Development Fund (S9) of the Ministry of the Environment, Japan.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=s9-5_asia-pacific https://www.godac.jamstec.go.jp/ipt/archive.do?r=s9-5_asia-pacific Thu, 29 May 2025 09:14:01 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=s9-5_asia-pacific/v1.91 https://www.godac.jamstec.go.jp/ipt/resource?r=omnh_lv [Marine Invertebrata specimen database of Osaka Museum of Natutal History] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=omnh_lv https://www.godac.jamstec.go.jp/ipt/archive.do?r=omnh_lv Wed, 28 May 2025 17:26:31 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=omnh_lv/v1.57 https://www.godac.jamstec.go.jp/ipt/resource?r=ossjp_rocky_sea_slugs [This data set is the result of an observation conducted by the Society for Observation of Sea Slugs in Osaka Bay in the rocky coast of the southeastern part of Osaka Bay. This survey was conducted by recording the species and number of sea slugs collected by approximately 30 or more participants for several hours during low tide at spring tide. Data are published in the Bulletin of the Osaka Museum of Natural History.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=ossjp_rocky_sea_slugs https://www.godac.jamstec.go.jp/ipt/archive.do?r=ossjp_rocky_sea_slugs Tue, 27 May 2025 09:21:27 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=ossjp_rocky_sea_slugs/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=toba_city_redlist [Red Data Book is a book describing information on endangered wildlife, including species names, ecology, distribution, current status, and factors of population decline. In 2023, Toba City published a Red Data Book listing 429 endangered marine species inhabiting the coastal and estuarine areas around Toba City. The book describes the endangered categories of the listed species according to the degree of threat of extinction and the causes of population decline. In addition to the scientific information, the book includes many pictures of underwater surveys and seascapes, history and culture between local people and the sea, and sea-related folklore in the Toba area as column articles of the book. Unique feature of the Toba Red Data Book is that it specializes in marine organisms including algae or off-shore specie, and evaluate the vulnerability of marine species at the prefectural level. This dataset contains background data collected to evaluate vulnerability of the species in the Toba Red Data Book, and the data were quality controlled and transformed to comply with the Darwin Core, OBIS Schema.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=toba_city_redlist https://www.godac.jamstec.go.jp/ipt/archive.do?r=toba_city_redlist Wed, 21 May 2025 09:11:31 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=toba_city_redlist/v1.3 https://www.godac.jamstec.go.jp/ipt/resource?r=snet-1008-101 [Database including information about fish specimens deposited in Hokkaido University, Japan] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=snet-1008-101 https://www.godac.jamstec.go.jp/ipt/archive.do?r=snet-1008-101 Wed, 09 Oct 2024 20:47:57 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=snet-1008-101/v1.8 https://www.godac.jamstec.go.jp/ipt/resource?r=okkjp_rocky_macrobiota [This dataset contains data of floral and faunal surveys of intertidal zone along the rocky coast of the southeastern part of Osaka Bay, eastern extremity of the Inland Sea of Japan, carried out annually at several stations by Association for the Research of Littoral Organisms in Osaka Bay (OKKJP). The survey is conducted for several hours during the spring low tide at each station, generally with at least 20 participants recording species by visual observation. Summarized data for every five years are published in Shizenshi-Kenkyu, Occasional Papers from the Osaka Museum of Natural History.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=okkjp_rocky_macrobiota https://www.godac.jamstec.go.jp/ipt/archive.do?r=okkjp_rocky_macrobiota Thu, 18 Jul 2024 16:15:39 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=okkjp_rocky_macrobiota/v1.2 https://www.godac.jamstec.go.jp/ipt/resource?r=oist_kh00-01_sulu-celebes_cnidaria [Pelagic cnidarians of the Sulu and Celebes Seas: February 2000 MOCNESS data set.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=oist_kh00-01_sulu-celebes_cnidaria https://www.godac.jamstec.go.jp/ipt/archive.do?r=oist_kh00-01_sulu-celebes_cnidaria Fri, 14 Jun 2024 16:12:35 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=oist_kh00-01_sulu-celebes_cnidaria/v1.91 https://www.godac.jamstec.go.jp/ipt/resource?r=kw_vi [This dataset contains data of brachyuran crabs collected by Keiji Wada in 1995-2007 in Vietnam and in 1984-2001 in Indonesia.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=kw_vi https://www.godac.jamstec.go.jp/ipt/archive.do?r=kw_vi Fri, 14 Jun 2024 16:12:35 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=kw_vi/v1.54 https://www.godac.jamstec.go.jp/ipt/resource?r=disbl_lwto-kanagawa [This dataset contains data of shallow-water fauna of Sagami bay which were collected during biological observation meeting by Discover Blue and citizen.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=disbl_lwto-kanagawa https://www.godac.jamstec.go.jp/ipt/archive.do?r=disbl_lwto-kanagawa Fri, 14 Jun 2024 16:12:25 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=disbl_lwto-kanagawa/v1.87 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_edna_deepsea [Deep-sea fish diversity using environmental DNA metabarcoding of pumped deep-sea water is monitored. Water samples were derived from the intakes located at 400m depth off Yaizu, Suruga Bay and 811m depth off Akazawa, Sagami Bay in Japan. Identical reads obtained by next generation sequencing were referred to the MitoFish (http://mitofish.aori.u-tokyo.ac.jp/), and more than 3% of the total reads were listed.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_edna_deepsea https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_edna_deepsea Fri, 14 Jun 2024 16:10:25 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_edna_deepsea/v1.38 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_multisplash2006_sagamibay_siphonophora [Please cite the original publication this dataset was based on as Grossmann, MM, Lindsay, DJ. 2013. Diversity and distribution of the Siphonophora (Cnidaria) in Sagami Bay, Japan, and their association with tropical and subarctic water masses. Journal of Oceanography (in press) and the current version of this dataset as Lindsay, DJ. "Date_accessed". Multiple Sampling Platform Survey of Whole Ecosystem Database (MULTI-SPLASH Database): Diversity and distribution of the Siphonophora (Cnidaria) in Sagami Bay, Japan, and their association with tropical and subarctic water masses. Mary M. Grossmann, Dhugal J. Lindsay] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_multisplash2006_sagamibay_siphonophora https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_multisplash2006_sagamibay_siphonophora Fri, 14 Jun 2024 16:10:25 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_multisplash2006_sagamibay_siphonophora/v1.92 https://www.godac.jamstec.go.jp/ipt/resource?r=fra-plankton [This dataset contains occurrence information of zooplankton obtained by research cruise related to the Japan Fisheries and Education Agency (FRA) from 1960 to 2003 in the Oyashio, Kuroshio-Oyashio Transition, and Kuroshio waters in the western North Pacific Ocean.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=fra-plankton https://www.godac.jamstec.go.jp/ipt/archive.do?r=fra-plankton Fri, 14 Jun 2024 16:16:55 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=fra-plankton/v1.56 https://www.godac.jamstec.go.jp/ipt/resource?r=s9-5_sg-sea [This dataset contains occurrence data of seagrasses in Southeast-Asia extracted from the literatures by S9-5 supported by the Environment Research and Technology Development Fund (S9) of the Ministry of the Environment, Japan.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=s9-5_sg-sea https://www.godac.jamstec.go.jp/ipt/archive.do?r=s9-5_sg-sea Fri, 14 Jun 2024 16:09:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=s9-5_sg-sea/v1.67 https://www.godac.jamstec.go.jp/ipt/resource?r=seto_marine_biological_laboratory_south_coast_hatakejima [Hatakejima Experimental Field is located in Tanabe Bay, Wakayama Prefecture, Japan, which is composed of Hatakejima Island and Komarujima Islet, connected to the former in low tide. Hatakejima Island was purchased by Kyoto University and was designated as the ‘Hatakejima Experimental Field’ in 1968. The long-term surveys have been formally conducted on the experimental field since 1969 as the Century of Research Project. In the south coast survey, all intertidal organisms including seaweeds were identified by sight and recorded in the 16 rocks along the southern and western coasts of Hatakejima Island. This dataset is the result of the south coast survey conducted from 1969.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=seto_marine_biological_laboratory_south_coast_hatakejima https://www.godac.jamstec.go.jp/ipt/archive.do?r=seto_marine_biological_laboratory_south_coast_hatakejima Fri, 14 Jun 2024 16:09:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=seto_marine_biological_laboratory_south_coast_hatakejima/v1.32 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_cem-ts [Marine biological samples collected by participants in Citizen Monitoring Program held by Mutsu Institute for Oceanography, JAMSTEC at Chijiri-hama, Mutsu city, Aomori pref.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_cem-ts https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_cem-ts Fri, 14 Jun 2024 16:09:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_cem-ts/v1.92 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-1-meiofauna-metabarcoding-data_1 [This dataset contains data of biological samples which were collected during scientific missions of JAMSTEC ship KAIREI and submersible KAIKO Mk-IV. Data of this dataset is derived from the Marine Biological Sample Database of JAMSTEC. At the original database, you may search sample information and collecting information.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-1-meiofauna-metabarcoding-data_1 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-1-meiofauna-metabarcoding-data_1 Fri, 14 Jun 2024 16:09:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-1-meiofauna-metabarcoding-data_1/v1.32 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_teams_0182_d01 [This is the first large image dataset and occurrence records of marine organisms in the Northwest Pacific off Tohoku, Japan. This area suffered by Great East Japan Earthquake 2011 and continental shelf and slope off of this area considered one of the most productive areas both for fishery and primary production in the world because of the complex mixture of the Kuroshio Current, Oyashio Current, and Tsugaru Warm Current. We compiled 3415 images of animals, stones, and sediments. Most of the images are of dominant species of Ophiuroidea (brittle stars), with 789 and 1421 images captured in two areas of different depth. These images are cropped from downward camera images collected during two dives in 2015 using remotely operated vehicles in a deeper area (670-800 m deep) off Kamaishi (cruise id KY15-08; dive no. HPD1812) and a shallower area (280 m deep) off Minami Sanriku town (cruise id NT15-E04; dive no. CRB17). The attribute of each image is listed in the subsequent comma delimited (csv) text file and the observed occurrence of each organisms was also converted into the text format used in Japan Ocean Biogeographic Information System Center (J-OBIS), which is comparable with Darwin Core 2.0. Basically, we recorded the higher taxonomic levels (e.g., order and class) that could be specified with certainty and added a list of potential species as an appendix. For better understanding the broad-scale impact of the earthquake along the continental shelf and slope, it is necessary to extract occurrence data of organisms from biological surveys. Gathering image or video data is appropriate for this purpose because most underwater surveys simultaneously record images and/or videos. This dataset will add the information of the status after 4 years of the disaster. These image data are also considered as training image data set for automatic extraction of organisms. We additionally updated DwC records from the data list in the paper of Yamakita et al. (2018) in 2020.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_teams_0182_d01 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_teams_0182_d01 Fri, 14 Jun 2024 16:09:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_teams_0182_d01/v1.38 https://www.godac.jamstec.go.jp/ipt/resource?r=cmarz_asia [CMarZ-Asia Database is an integrated search system of zooplankton information provided by the CMarZ.] hosonot@jamstec.go.jp (takashi hosono) https://www.godac.jamstec.go.jp/ipt/eml.do?r=cmarz_asia https://www.godac.jamstec.go.jp/ipt/archive.do?r=cmarz_asia Fri, 14 Jun 2024 16:08:58 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=cmarz_asia/v1.64 https://www.godac.jamstec.go.jp/ipt/resource?r=prfm_obsdata [This dataset contains observation data of reef fishes based on routine underwater research at Chiba, Hiroshima, Koch, Fukuoka, Nagasaki and Kagoshima, Japan in order to estimate global warming impacts on reef fish fauna. See detail "Sunobe T., H. Kawase, Y. Sakai, N. Shimizu, N. Mochioka, T. Takegaki, Y. Nakamura and S. Dewa, 2014. Global warming and comparison of fish fauna in southern Japan. Report of Chiba Biodiversity Center 7:3-13."] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=prfm_obsdata https://www.godac.jamstec.go.jp/ipt/archive.do?r=prfm_obsdata Fri, 14 Jun 2024 16:08:58 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=prfm_obsdata/v1.79 https://www.godac.jamstec.go.jp/ipt/resource?r=seto_marine_biological_laboratory_ohgaki2011 [Dataset includes the species composition of mollusks on a rocky intertidal platform in Cape Bansho, Wakayama, Japan from 1985 to 2010. The data were digitized from the paper processing book: "Ohgaki et al. (2011) A record of the intertidal malacofauna of Cape Bansho, Wakayama, Japan, from 1985 to 2010. Publications of the Seto Marine Biological Laboratory Special Publication Series 11:1-311". The data were also quality-controlled and transformed to comply with the Darwin Core/OBIS Schema.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=seto_marine_biological_laboratory_ohgaki2011 https://www.godac.jamstec.go.jp/ipt/archive.do?r=seto_marine_biological_laboratory_ohgaki2011 Fri, 14 Jun 2024 16:12:35 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=seto_marine_biological_laboratory_ohgaki2011/v1.50 https://www.godac.jamstec.go.jp/ipt/resource?r=snet-1125-102 [Scleractinia specimens deposited at Kuroshio Biological Research Foundation] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=snet-1125-102 https://www.godac.jamstec.go.jp/ipt/archive.do?r=snet-1125-102 Fri, 14 Jun 2024 16:07:07 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=snet-1125-102/v1.36 https://www.godac.jamstec.go.jp/ipt/resource?r=seto_marine_biological_laboratory_entire_coast_hatakejima [Hatakejima Experimental Field is located in Tanabe Bay, Wakayama Prefecture, Japan, which is composed of Hatakejima Island and Komarujima Islet, connected to the former in low tide. Hatakejima Island was purchased by Kyoto University and was designated as the ‘Hatakejima Experimental Field’ in 1968. The long-term surveys have been formally conducted on the experimental field since 1969 as the Century of Research Project. In the entire coast survey, the whole area of the experimental field was subdivided into 43 plots, and presence and absence and relative abundance of selected species of intertidal invertebrates were recorded. This dataset is the result of the entire coast survey conducted from 1983.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=seto_marine_biological_laboratory_entire_coast_hatakejima https://www.godac.jamstec.go.jp/ipt/archive.do?r=seto_marine_biological_laboratory_entire_coast_hatakejima Fri, 14 Jun 2024 16:07:17 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=seto_marine_biological_laboratory_entire_coast_hatakejima/v1.30 https://www.godac.jamstec.go.jp/ipt/resource?r=planktonbenthosresearch [Data extracted from manuscripts published in "Plankton and Benthos Research", a joint publication of The Plankton Society of Japan and The Japanese Association of Benthology. These manuscripts are available as Open Access pdfs at J-STAGE (https://www.jstage.jst.go.jp/browse/pbr)] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=planktonbenthosresearch https://www.godac.jamstec.go.jp/ipt/archive.do?r=planktonbenthosresearch Fri, 14 Jun 2024 16:07:07 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=planktonbenthosresearch/v1.69 https://www.godac.jamstec.go.jp/ipt/resource?r=seto_marine_biological_laboratory_ohgaki2019 [Continuous long-term monitoring is important for detecting ecological changes and understanding their causes, including anthropogenic impacts such as climate changes and eutrophication. Nonetheless, such long-term population studies have been rare, especially for sea urchins, which can affect community dynamics owing to their extensive herbivory and large population fluctuations. Here we present a long-term (from 1963 to 2014) dynamics of sea urchins in a fixed quadrat on a lower intertidal rocky flat in Hatakejima Island, southern Japan. We also conducted a complementary survey over the entire island approximately every five years from 1975 to 2013, and a 41-year assay for developmental abnormality of the sea urchin Heliocidaris crassispina using water adjacent to the island. The abundance of three commonest species in this area (H. crassispina, Echinostrephus molaris, and Echinometra spp.) and the richness of urchin species showed large variations, with high numbers in the 1960s and 1970s, followed by an abrupt decline in the late 1970s or early 1980s, and a gradual recovery subsequently. The species abundance and richness in the entire island survey showed good correlations with those in the quadrat census. Statistical analyses indicated that increasing water temperature and red tides were the major factors influencing the dynamics of abundance and species richness. Our studies reveal that anthropogenic environmental changes influence the long-term dynamics in abundance and richness of sea urchins. The data were digitized and transformed to comply with the Darwin Core/OBIS Schema in 2020.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=seto_marine_biological_laboratory_ohgaki2019 https://www.godac.jamstec.go.jp/ipt/archive.do?r=seto_marine_biological_laboratory_ohgaki2019 Fri, 14 Jun 2024 16:07:07 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=seto_marine_biological_laboratory_ohgaki2019/v1.45 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_teams_rov [The occurrence data of demersal fish and large benthos of the deep-sea off north-east coast of Japan, which extracted from the movie recorded by remotely-operated vehicles (ROV) in the deep-sea off the northeastern coast of Japan through “Tohoku Ecosystem-Associated Marine Sciences” project after the 2011 Tohoku Earthquake. Number of individuals were counted about every 10 minutes during the dive over sea bottom.] fushoa@jamstec.go.jp (Ayana Fusho) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_teams_rov https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_teams_rov Fri, 14 Jun 2024 16:07:07 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_teams_rov/v1.41 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-2-meiofauna-18s-data_2019 [SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains 18S rRNA gene based phylogenetic composition of meiofauna community determined from sediment core samples which have been collected in the 2019 cruise of R/V Kaiyo-Maru No.1 (KAIYO ENGINEERING CO., LTD.).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-2-meiofauna-18s-data_2019 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-2-meiofauna-18s-data_2019 Sat, 01 Jun 2024 12:00:14 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-2-meiofauna-18s-data_2019/v1.18 https://www.godac.jamstec.go.jp/ipt/resource?r=jambio_rinkai [Japanese Association for Marine Biology (JAMBIO), an association of Japanese university-based marine stations, was established to facilitate collaboration in research and education and information sharing among the research community. One of its central strategic projects is the JAMBIO Coastal Organism Joint Surveys, in which researchers and students across the country stay at a marine station for a few days, collect, and make records of marine organisms. As of 2021, 22 surveys have been performed at 7 locations, with 408 participants from 37 institutes taking part. Some of the organisms collected during the JAMBIO Coastal Organism Joint Surveys, as well as other organisms collected by researchers at Shimoda Marine Research Center, University of Tsukuba, are listed in the JAMBIO Regionally Integrated Marine Database (RINKAI). Data of this dataset is derived from RINKAI, and photographs of the organisms are displayed at the original database (https://www.shimoda.tsukuba.ac.jp/~marinelife-db/).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jambio_rinkai https://www.godac.jamstec.go.jp/ipt/archive.do?r=jambio_rinkai Sat, 01 Jun 2024 00:00:13 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jambio_rinkai/v1.26 https://www.godac.jamstec.go.jp/ipt/resource?r=echo_stylaraea [Distributions of Stylaraea punctata was investigated in Okinawa Island, Japan in 2019. We conducted diving surveys at 14 sites and found S. punctata colonies at 4 of the 14 sites, indicating S. punctata inhabits around Okinawa Island. However, only a few number of S. punctata colonies were found in each site, suggesting the rareness of S. punctata in the island. Considering the conservation of the species, the coordinates of the studied sites are disambiguated. Detailed location information may be available on request.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=echo_stylaraea https://www.godac.jamstec.go.jp/ipt/archive.do?r=echo_stylaraea Sat, 01 Jun 2024 00:00:13 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=echo_stylaraea/v1.29 https://www.godac.jamstec.go.jp/ipt/resource?r=tokai_univ_kb_shipboard_oceanographic_laboratory_3 [This dataset contains records of organisms observed during the cruises of R/V Bosei-maru, conducted for the "Shipboard Oceanographic Laboratory 3" in the Department of Marine Biology, Tokai University in 2016-2018. Each cruise made a round trip from Shimizu Port in Shizuoka Prefecture to Chichijima in Ogasawara Islands. Data including seabirds, fishes and dolphins/whales based on visual inspections, trolling and rod fishing is provided.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=tokai_univ_kb_shipboard_oceanographic_laboratory_3 https://www.godac.jamstec.go.jp/ipt/archive.do?r=tokai_univ_kb_shipboard_oceanographic_laboratory_3 Sat, 01 Jun 2024 00:00:13 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=tokai_univ_kb_shipboard_oceanographic_laboratory_3/v1.27 https://www.godac.jamstec.go.jp/ipt/resource?r=nies_coraloccurrence [This dataset contains the species occurrence record of zooxanthellate reef‐building corals at 1059 sites on the Japanese coast, recorded from 1929 to 2020. We compiled coral occurrence data including 482 species from 162 literature sources, most of which were written in Japanese and published as gray literature in local journals or individual reports. This dataset is published as a data paper in Ecological Research (see https://doi.org/10.1111/1440-1703.12136).] hosonot@jamstec.go.jp (takashi hosono) https://www.godac.jamstec.go.jp/ipt/eml.do?r=nies_coraloccurrence https://www.godac.jamstec.go.jp/ipt/archive.do?r=nies_coraloccurrence Sat, 01 Jun 2024 00:00:23 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=nies_coraloccurrence/v1.41 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-2-prokaryotes-16s-data_2019 [SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains 16S rRNA gene based phylogenetic composition of prokaryotic community determined from sediment core samples which have been collected in the 2019 cruise of R/V Kaiyo-Maru No.1 (KAIYO ENGINEERING CO., LTD.).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-2-prokaryotes-16s-data_2019 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-2-prokaryotes-16s-data_2019 Thu, 06 Jul 2023 15:55:53 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-2-prokaryotes-16s-data_2019/v1.6 https://www.godac.jamstec.go.jp/ipt/resource?r=univ_ryukyus_foram [This dataset contains the occurrence of selected large benthic foraminifers around Japanese Islands. Data of this dataset is derived from publications by mainly Japanese researchers, and has been checked from the occurrence list and/or plates. This dataset is based on Fujita (2004) presented by a poster at the 7th Japanese Coral Reef Society Meeting, and was prepared with a cooperation of GODAC.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=univ_ryukyus_foram https://www.godac.jamstec.go.jp/ipt/archive.do?r=univ_ryukyus_foram Thu, 08 Jun 2023 15:53:28 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=univ_ryukyus_foram/v1.3 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-2-megafauna-video-data_2019 [SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains occurrence of megafauna recorded by video cameras of Edokko Mark 1, which were deployed on the seafloor from 2019 to 2020. Three cameras with different angles (upper, middle, lower) have been installed within Eodokko Mark 1, and data for each camera is described.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-2-megafauna-video-data_2019 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-2-megafauna-video-data_2019 Thu, 20 Apr 2023 11:29:23 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-2-megafauna-video-data_2019/v1.5 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-2-sediment_parameter-data_2022 [SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains physicochemical parameters and microscopic counts of meiofauna determined from sediment core samples which have been collected by the Shinkai 6500 in the 2022 cruise of R/V Yokosuka (YK22-08C).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-2-sediment_parameter-data_2022 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-2-sediment_parameter-data_2022 Thu, 20 Apr 2023 12:09:28 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-2-sediment_parameter-data_2022/v1.4 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-2-sediment_parameter-data_2019 [SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains physicochemical parameters and microscopic counts of meiofauna determined from sediment core samples which have been collected in the 2019 cruise of R/V Kaiyo-Maru No.1 (KAIYO ENGINEERING CO., LTD.).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-2-sediment_parameter-data_2019 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-2-sediment_parameter-data_2019 Thu, 20 Apr 2023 11:33:45 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-2-sediment_parameter-data_2019/v1.5 https://www.godac.jamstec.go.jp/ipt/resource?r=nies_mudshrimp [This dataset includes 53 specimen records of Japanese mud shrimp collected from 8 mud flat sites in Japan from June 2020 to July 2022. This study is published as an open access paper in the ZooKeys at https://doi.org/10.3897/zookeys.1182.105030.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=nies_mudshrimp https://www.godac.jamstec.go.jp/ipt/archive.do?r=nies_mudshrimp Wed, 07 Feb 2024 15:26:59 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=nies_mudshrimp/v1.0 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-2-megafauna-video-data_2022 [SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains occurrence of megafauna recorded by video cameras of Edokko Mark 1, which were deployed on the seafloor in the 2022 cruise (KR22-01C, YK22-08C). Three cameras with different angles (upper, middle, lower) have been installed within Eodokko Mark 1, and data for each camera is described.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-2-megafauna-video-data_2022 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-2-megafauna-video-data_2022 Thu, 20 Apr 2023 12:10:44 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-2-megafauna-video-data_2022/v1.4 https://www.godac.jamstec.go.jp/ipt/resource?r=univ_tokyo_okitori_coral [Okinotorishima Island, an isolated remote table reef island in the southernmost territory of Japan, provides an excellent site to examine the effect of only global stress, as there are no local human stresses present. Yamamoto et al. (2023) established 17 fixed quadrats (1×1 meter) on 9 knolls in the shallow lagoon of Okinotorishima Island, and observed coral population every May from 2006 to 2015. This dataset compiles data on coverage and number of colonies of Acropora and co-occurring corals published in Yamamoto et al. (2023). Yamamoto, H., Kawasaki, T., Tamura, K., Kanyama, T. Hosono, T., Fudo, M., Omori, M., Kayanne, H.: Decline in the Acropora population due to repeated moderate disturbances in Okinotorishima Island, Japan. Glaxea: Jour. Coral Reef Studies 25: 18-30 (2023). doi: 10.3755/galaxea.G26-3] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=univ_tokyo_okitori_coral https://www.godac.jamstec.go.jp/ipt/archive.do?r=univ_tokyo_okitori_coral Tue, 05 Sep 2023 09:04:08 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=univ_tokyo_okitori_coral/v1.3 https://www.godac.jamstec.go.jp/ipt/resource?r=tumsat_jedi-oceans [To understand multiscale process of planktonic ecosystem in the Kuroshio, a cabled observatory system (JEDI-System/OCEANS) was developed and deployed at a coastal area (20 m depth) of Oshima Island,Tokyo, Japan, during 2014 to 2016 (Yamazaki et al., 2016). The observatory system can measure environmental parameters such as temperature and salinity, and take microscopic plankton images continuously. In this dataset, planktonic images obtained by the system were identified using machine learning with the validation process and compiled into DarwinCore occurrence records. All biological images and measured environmental parameters were archived at JST NBDC (https://dbarchive.biosciencedbc.jp/en/jedisystem-oceansdb/desc.html). H. Yamazaki, S. Gallager, M. Tanaka and K. Yamaguchi, "A cabled observatory system for integrated long term, high-frequency biological, chemical, physical measurement for understanding planktonic ecosystem," 2016 Techno-Ocean (Techno-Ocean), 2016, pp. 429-434, doi: 10.1109/Techno-Ocean.2016.7890692.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=tumsat_jedi-oceans https://www.godac.jamstec.go.jp/ipt/archive.do?r=tumsat_jedi-oceans Mon, 01 Jan 2024 00:00:58 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=tumsat_jedi-oceans/v1.4 https://www.godac.jamstec.go.jp/ipt/resource?r=jamstec_sip-2-meiofauna-18s-data_2022 [SIP Ocean program conducted the research cruises for technical development and data collection of baseline condition in deep-sea environments off Minami Torishima. This data set contains 18S rRNA gene based phylogenetic composition of meiofauna community determined from sediment core samples which have been collected by the Shinkai 6500 in the 2022 cruise of R/V Yokosuka (YK22-08C). The two kinds of PCR primer set have been used for the same sample to compare the phylogenetic composition.] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=jamstec_sip-2-meiofauna-18s-data_2022 https://www.godac.jamstec.go.jp/ipt/archive.do?r=jamstec_sip-2-meiofauna-18s-data_2022 Tue, 04 Jul 2023 16:44:23 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=jamstec_sip-2-meiofauna-18s-data_2022/v1.3 https://www.godac.jamstec.go.jp/ipt/resource?r=esrec_marine_crustacean_collection [This dataset contains data of decapod crustacean specimens which were collected from the San’in District (mainly Shimane Prefecture and Tottori Prefecture), western Japanese coast of the Sea of Japan. The details of the specimens are treated in the following publications: Osawa, M. (2022a) Anomuran Crustacea in San’in District (Shimane Prefecture and Tottori Prefecture), Western Japan. Estuary Research Center, Special Publications, No. 1. Online published by Estuary Research Center, Shimane University, 148pp. Available at https://www.esrec.shimane-u.ac.jp/docs2/2022112800017/. (in Japanese). Osawa, M. (2022b) Brachyuran Crustacea in Estuarine Areas of Shimane Prefecture, Western Japan.Estuary Research Center, Special Publications, No. 2. Online published by Estuary Research Center, Shimane University, 85pp. Available at https://www.esrec.shimane-u.ac.jp/docs2/2022112800017/. (in Japanese).] bismal-admin@jamstec.go.jp (BISMaL System Admin) https://www.godac.jamstec.go.jp/ipt/eml.do?r=esrec_marine_crustacean_collection https://www.godac.jamstec.go.jp/ipt/archive.do?r=esrec_marine_crustacean_collection Tue, 18 Jul 2023 15:55:14 +0900 https://www.godac.jamstec.go.jp/ipt/resource?id=esrec_marine_crustacean_collection/v1.3