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Taxonomic tree
Occurrence records
Dataset
More
About BISMaL
About BISMaL data
日本語
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Taxonomic tree
Occurrence records
Dataset
More
About BISMaL
About BISMaL data
日本語
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Image dataset of ophiuroid and other deep sea benthic organisms in 2015 extracted from the survey off Sanriku, Japan, by the research following the Great East Japan Earthquake 2011
Abstract
This is the first large image dataset and occurrence records of marine organisms in the Northwest Pacific off Tohoku, Japan. This area suffered by Great East Japan Earthquake 2011 and continental shelf and slope off of this area considered one of the most productive areas both for fishery and primary production in the world because of the complex mixture of the Kuroshio Current, Oyashio Current, and Tsugaru Warm Current. We compiled 3415 images of animals, stones, and sediments. Most of the images are of dominant species of Ophiuroidea (brittle stars), with 789 and 1421 images captured in two areas of different depth. These images are cropped from downward camera images collected during two dives in 2015 using remotely operated vehicles in a deeper area (670-800 m deep) off Kamaishi (cruise id KY15-08; dive no. HPD1812) and a shallower area (280 m deep) off Minami Sanriku town (cruise id NT15-E04; dive no. CRB17). The attribute of each image is listed in the subsequent comma delimited (csv) text file and the observed occurrence of each organisms was also converted into the text format used in Japan Ocean Biogeographic Information System Center (J-OBIS), which is comparable with Darwin Core 2.0. Basically, we recorded the higher taxonomic levels (e.g., order and class) that could be specified with certainty and added a list of potential species as an appendix. For better understanding the broad-scale impact of the earthquake along the continental shelf and slope, it is necessary to extract occurrence data of organisms from biological surveys. Gathering image or video data is appropriate for this purpose because most underwater surveys simultaneously record images and/or videos. This dataset will add the information of the status after 4 years of the disaster. These image data are also considered as training image data set for automatic extraction of organisms. We additionally updated DwC records from the data list in the paper of Yamakita et al. (2018) in 2020.
Citation
Yamakita, T., Yokooka, H., Fujiwara, Y., Kawato, M., Tsuchida, S., Ishibashi, S., Kurokawa, T. and Fujikura, K. (2018) Image dataset of ophiuroid and other deep sea benthic organisms in 2015 extracted from the survey off Sanriku, Japan, by the research following the Great East Japan Earthquake 2011. Ecological Research 33: 285-285.https://doi.org/10.1007/s11284-018-1571-7
Literature
Information on literature which is important for understanding data, such as literature which became the basis of the data set, is displayed.
Yamakita, T., Yokooka, H., Fujiwara, Y., Kawato, M., Tsuchida, S., Ishibashi, S., Kurokawa, T. and Fujikura, K. (2018) Image dataset of ophiuroid and other deep sea benthic organisms in 2015 extracted from the survey off Sanriku, Japan, by the research following the Great East Japan Earthquake 2011. Ecological Research 33: 285-285. https://doi.org/10.1007/s11284-018-1571-7
URL
http://www.i-teams.jp/catalog/rias/metadataDisp/0182_D01?lang=en
License
This work is licensed under a
Creative Commons Attribution (CC-BY) 4.0 License
.
Contacts
Takehisa Yamakita
Resource Contact, Resource Creator, Metadata Provider
Organization: JAMSTEC
Phone: +81(46)-867-972
Address: 2-15, Natsushima-cho Yokosuka Kanagawa 237-0061 Japan
Home Page:
Email: yamakitat@jamstec.go.jp
Datasets and providers
JAMSTEC
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Coastal Ecosystem Monitoring in the Tsugaru strait side of Shimokita
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E-library of Deep-sea Images, JAMSTEC
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Environmental baseline data in abyssal plain off Minami Torishima based on 16S rRNA gene
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Environmental baseline data in abyssal plain off Minami Torishima based on 18S rRNA gene
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Environmental baseline data in abyssal plain off Minami Torishima based on 18S rRNA gene obtained from the 2022 cruise
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Environmental baseline data in abyssal plain off Minami Torishima based on megafauna occurrence
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Environmental baseline data in abyssal plain off Minami Torishima based on megafauna occurrence obtained from the 2022 cruise
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Environmental baseline data in abyssal plain off Minami Torishima based on physicochemical parameters and meiofauna community
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Environmental baseline data in abyssal plain off Minami Torishima based on physicochemical parameters and meiofauna community obtained from the 2022 cruise
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Images in Coral Reef Network WEB System, as a snapshot of fauna and flora around coral reefs in Ryukyu Islands
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JAMSTEC_MULTISPLASH2006_SagamiBay_Siphonophora
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Marine Biological Sample Database, JAMSTEC
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Metabarcoding data set at the Iheya-Minor Ridge in the Sakai hydrothermal vent field
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Monitoring of deep-sea fish diversity using environmental DNA metabarcoding of pumped deep-sea water in Sagami and Suruga Bays, Japan
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Occurrence dataset of demersal fish and benthic organisms in the deep-sea off the northeastern coast of Japan, recorded by ROV after the 2011 Earthquake off the Pacific coast of Tohoku
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Species list recorded by baited cameras at deep sea area in Japan
Occurrence records
Occurrence records →
[Map・Summary]
■
Number of record
2,830
■
Record acquisition period
2015/05/05 ~ 2015/11/12
* Date last modified : 2021/02/03
■
Record acquisition range
Latitude
38.558025 ~ 39.31055532
Longitude
141.9449 ~ 142.3253202
Depth
60.2 ~ 812 m
[Environment]
[Registered taxon]
■
Number of taxonomy
17
Taxonomy
■
Number of specimen
4
Specimen
Taxon level lower than family :
78
%
Taxon level lower than species :
78
%
Scientific name list
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10
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500
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Date
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